Package

alfresco

alfresco: R functions for ALFRESCO wildfire model.

Default options

alfdef()

Common default values

Stock fire events processing

pp_fire_events()

Prepare list of data frames during ALFRESCO post-processing

pp_df_prep()

Prepare data frame during ALFRESCO post-processing

pp_fsv() pp_fsv_emp() pp_fsv_save()

Fire size by vegetation ALFRESCO post-processing

prep_fire_events() prep_fire_events_emp()

ALFRESCO post-processing of fire events

fire_scar_brick()

Prepare fire scar bricks

prep_points()

Prepare points matrix and locations vector

frp_maps_no_buffer()

Make stock FRP maps

General data extraction

run_alf_extraction()

Run ALFRESCO data extraction

extract_alf() prep_alf_files() extract_fsv() extract_av()

Extract ALFRESCO data

get_domain_cells()

Load cell index data frame for subregions

get_veg_labels()

Get vegetation labels

get_out_dirs()

Get ALFRESCO output directories

alf_extract_slurm()

Slurm script for ALFRESCO data extractions

alf_extract_rscript()

R script for ALFRESCO data extraction

alf_prep_slurm()

Slurm script for ALFRESCO probability distributions

alf_prep_rscript()

R script for ALFRESCO probability distributions

extract_alf_stops() prep_alf_stops()

ALFRESCO extraction stop error checks

plot_map_zoom()

Plot map composition for radial buffer around a point

Extracted data curation

alf_dist()

Compute probability distribution tables

alf_dist_inputs()

Table inputs from extracted data

extract_alf_stops() prep_alf_stops()

ALFRESCO extraction stop error checks

fsv()

Compute fire size by vegetation class

fsdf()

Fire size and cumulative burn data frame

cbdf()

Cumulative burn over time data frame

Historical fire data

fire_perimeters()

Obtain Alaska fire perimeter data

Fire point probability

point_fire()

Probability of fire

point_probs()

Fire probabilities for point locations

fire_probs()

Fire point probabilities

fire_weights()

Fire probability weights for point locations

Fire management options

fmo_add_buffer()

Add buffer to FMO zone base map

ba_ratios()

Obtain total cumulative burn area ratios

save_fmo_ratios()

Save FMO ratios maps

save_fmo_panel()

Save FMO panel plot

fmo_cb_reduction()

FMO cumulative burn reduction table

ba_fmo()

Burn area by FMO zone

File system data organization

outputs_as_inputs()

Copy ALFRESCO output maps

copy_alf_outputs()

Generate bash script for copying ALFRESCO maps

Projections

wgs2ak()

Convert from WGS84 to Alaska Albers projection

Command line helpers

prep_comArgs()

Prepare command line arguments

prep_alf_frp()

Helper function for FRP processing

Data

obs_fmo_ba

Historical Alaska annual burn area by fire management options zones (FMOs).